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Intron Name: Anas_platyrhynchos_platyrhynchos_10_11939021_11954132_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11939021 - 11954132

Intron Length:

15112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAATCCT

5'SS Class:

major

3'SS Sequence:

CCCTTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTAAA

U12 Branch Point Sequence:

TGTGCTCTAAAA

Flanking Amino Acid:

MGLEVLAMDQK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

1.1

68.7

42.2

Major BPS

0.57

73.6

28.6

Major PPT

88.4

0.86

0.6

86.9

23.7

Minor 5ss

35.8

-1.6

42.9

43.9

Minor BPS

50.6

0.01

1.9

66.08

40.1

Associated Gene:

Gene:

CLCN5

Ensembl Gene ID:

ENSAPLG00000011775

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041032

11914476 - 11954521

40046

ENSAPLT00000021705

11914476 - 11956536

42061