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Intron Name: Anas_platyrhynchos_platyrhynchos_10_11954210_11954444_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

11954210 - 11954444

Intron Length:

235

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAAGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTTAC

U12 Branch Point Sequence:

CTCGCCTGAGCA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.9

0.96

0.8

35.3

Major BPS

54.8

0.12

1.1

47.1

37.6

Major PPT

1.01

0.6

88.4

28.7

Minor 5ss

33.8

-1.8

2.9

43.7

43.6

Minor BPS

48.8

-0

1.9

59.78

46.1

Associated Gene:

Gene:

CLCN5

Ensembl Gene ID:

ENSAPLG00000011775

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041032

11914476 - 11954521

40046