Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_10_12019164_12025990_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12019164 - 12025990

Intron Length:

6827

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCGTGT

5'SS Class:

major

3'SS Sequence:

TTTTGTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTGAA

U12 Branch Point Sequence:

CGTATCTGAATG

Flanking Amino Acid:

MFLVQYAGLNHLSFDPA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.9

0.4

1.2

61.5

45.6

Major BPS

73.3

0.58

0.9

63.4

35.6

Major PPT

90.9

0.92

0.7

88.9

28.1

Minor 5ss

42.9

-0.8

3.5

65.1

46.1

Minor BPS

49.9

-0.1

1.6

53.28

41.8

Associated Gene:

Gene:

ENOX2

Ensembl Gene ID:

ENSAPLG00000010350

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010828

11988039 - 12026012

37974