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Intron Name: Anas_platyrhynchos_platyrhynchos_10_12039075_12040142_R


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
12039075 - 12040142

Intron Length:
1068

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TGT|GTGAGTATT

5'SS Class:
major

3'SS Sequence:
GGTGTATGTATAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTCTGAT

U12 Branch Point Sequence:
TCCTCTCTGATG

Flanking Amino Acid:
LMGDTIFAHFVSSFTCGLAG

Intron Amino Acid Position:
205

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.1
0.57
1.1
79.9
34.9

Major BPS
79
0.72
1
69
38.9

Major PPT
61.4
0.26
1.1
54.3
45

Minor 5ss
38.2
-1.3
3
52.2
44.4

Minor BPS
49
-0.2
1.7
54.29
41.8

Associated Gene:

Gene:
SLC25A14

Ensembl Gene ID:

Chromosome:
10

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

12037604 - 12044459
6856