Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_10_12047233_12047377_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12047233 - 12047377

Intron Length:

145

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTACGGGCG

5'SS Class:

major

3'SS Sequence:

GCTCTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCGCAG

U12 Branch Point Sequence:

GGTGCCGCAGCG

Flanking Amino Acid:

EYKDSAWVFVGGLPYELTEG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.8

0.44

1.1

53.2

Major BPS

36.5

-0.8

1.6

42.9

Major PPT

72.3

0.5

0.8

65.6

30.3

Minor 5ss

-2.4

3.6

38.9

46.4

Minor BPS

-0.9

2.3

45.22

46.5

Associated Gene:

Gene:

RBMX2

Ensembl Gene ID:

ENSAPLG00000010127

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010543

12045273 - 12047587

2315