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Intron Name: Anas_platyrhynchos_platyrhynchos_10_12069408_12069533_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12069408 - 12069533

Intron Length:

126

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGAGAT

5'SS Class:

strong_major

3'SS Sequence:

TGACCAATTAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

ATCAGTTCAACT

Flanking Amino Acid:

SIRARDPGARVLIVSEDPSL

Intron Amino Acid Position:

106

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

75.1

35.1

Major BPS

81.8

0.79

1.1

34.5

Major PPT

55.8

0.13

1.1

53.4

39.5

Minor 5ss

31.7

-2.1

3.4

46.2

Minor BPS

48.1

-0

67.05

43.8

Associated Gene:

Gene:

AIFM1

Ensembl Gene ID:

ENSAPLG00000009272

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024644

12064741 - 12080400

15660

ENSAPLT00000020815

12063312 - 12080400

17089

ENSAPLT00000009696

12064992 - 12080400

15409

ENSAPLT00000028051

12063312 - 12080400

17089