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Intron Name: Anas_platyrhynchos_platyrhynchos_10_12188165_12189057_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12188165 - 12189057

Intron Length:

893

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAAATAA

5'SS Class:

strong_major

3'SS Sequence:

ACTTGCTTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

CTCTGCATGACT

Flanking Amino Acid:

LYRGVSPAILGAVPFSAGSF

Intron Amino Acid Position:

172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

76.3

28.1

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

0.56

0.9

66.2

40.2

Minor 5ss

36.6

-1.5

3.1

46.9

48.4

Minor BPS

49.6

0.05

2.1

71.84

45.3

Associated Gene:

Gene:

SLC25A43

Ensembl Gene ID:

ENSAPLG00000023829

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043905

12174776 - 12193460

18685