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Intron Name: Anas_platyrhynchos_platyrhynchos_10_12202989_12203220_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

12202989 - 12203220

Intron Length:

232

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGATGT

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTGTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTGAT

U12 Branch Point Sequence:

TCTTCTGTGACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

74.2

37.1

Major BPS

73.6

0.59

1.2

65.3

43.7

Major PPT

75.2

0.57

71.7

38.2

Minor 5ss

45.8

-0.4

2.9

65.2

Minor BPS

59.3

0.29

73.66

38.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012389

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036603

12198032 - 12208416

10385

ENSAPLT00000012889

12202835 - 12208416

5582