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Intron Name: Anas_platyrhynchos_platyrhynchos_10_12249164_12254127_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12249164 - 12254127

Intron Length:

4964

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCAGT

5'SS Class:

strong_major

3'SS Sequence:

TCTCATGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

ACTTCCATAAAT

Flanking Amino Acid:

ETGETVEECTGKKKSKFQTF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.9

81.8

38.5

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

78.6

0.64

0.9

72.4

37.3

Minor 5ss

41.1

-1

2.9

57.9

46.4

Minor BPS

65.1

0.55

1.7

40.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012423

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023467

12234781 - 12276248

41468

ENSAPLT00000012938

12227910 - 12276248

48339