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Intron Name: Anas_platyrhynchos_platyrhynchos_10_12254300_12258620_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12254300 - 12258620

Intron Length:

4321

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGCTGG

5'SS Class:

major

3'SS Sequence:

TCCTCCCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAGTGAC

U12 Branch Point Sequence:

AGTGCAGTGACC

Flanking Amino Acid:

ANALHSPKEAGPKGSMGNKA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

1.1

60.6

46.7

Major BPS

51.2

0.03

1.2

44.4

38.7

Major PPT

81.7

0.71

0.7

72.9

Minor 5ss

42.8

-0.8

2.9

47.3

48.1

Minor BPS

44.2

-0.4

2.3

57.9

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012423

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023467

12234781 - 12276248

41468

ENSAPLT00000012938

12227910 - 12276248

48339