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Intron Name: Anas_platyrhynchos_platyrhynchos_10_12270647_12271407_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12270647 - 12271407

Intron Length:

761

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTTATA

5'SS Class:

strong_major

3'SS Sequence:

GCTTCTTTTATAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCAAAA

U12 Branch Point Sequence:

TTTACTTCAAAA

Flanking Amino Acid:

SKKQNGSKPSEKVSSPHLET

Intron Amino Acid Position:

832

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

81.6

31.3

Major BPS

68.1

0.45

73.5

28.6

Major PPT

81.2

0.7

0.8

32.6

Minor 5ss

45.5

-0.5

2.5

60.1

44.4

Minor BPS

60.5

0.33

1.7

73.97

37.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012423

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023467

12234781 - 12276248

41468

ENSAPLT00000012938

12227910 - 12276248

48339