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Intron Name: Anas_platyrhynchos_platyrhynchos_10_12271560_12272260_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12271560 - 12272260

Intron Length:

701

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGAGTAC

5'SS Class:

major

3'SS Sequence:

CCTCCTTTTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

CTTATTTGCATT

Flanking Amino Acid:

KASTKVDQEEQVICASENIL

Intron Amino Acid Position:

883

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.49

1.1

63.3

37.9

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

80.6

0.69

0.7

76.1

25.9

Minor 5ss

-1.7

3.6

48.7

47.8

Minor BPS

45.4

-0.2

1.8

64.28

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012423

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023467

12234781 - 12276248

41468

ENSAPLT00000012938

12227910 - 12276248

48339