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Intron Name: Anas_platyrhynchos_platyrhynchos_10_12272367_12276075_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12272367 - 12276075

Intron Length:

3709

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTCTTG

5'SS Class:

weak_major

3'SS Sequence:

TTGTTGTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TGATGGATATCT

Flanking Amino Acid:

QMKTSISAAAGKVGPIAQEA

Intron Amino Acid Position:

918

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.1

64.2

42.4

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

75.8

0.58

1.1

72.9

42.2

Minor 5ss

62.7

0.43

2.2

73.2

43.6

Minor BPS

39.3

-0.7

2.6

62.5

46.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012423

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023467

12234781 - 12276248

41468

ENSAPLT00000012938

12227910 - 12276248

48339