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Intron Name: Anas_platyrhynchos_platyrhynchos_10_12309049_12310418_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12309049 - 12310418

Intron Length:

1370

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGATC

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTTACACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

CTCTCTTTACAC

Flanking Amino Acid:

TSHNLQRLLKVNVEQKKGFP

Intron Amino Acid Position:

334

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

79.3

34.3

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

79.8

0.67

0.8

75.9

31.6

Minor 5ss

36.2

-1.6

3.4

51.2

45.7

Minor BPS

53.6

0.09

1.8

62.66

43.3

Associated Gene:

Gene:

LONRF3

Ensembl Gene ID:

ENSAPLG00000012610

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013144

12300412 - 12314772

14361