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Intron Name: Anas_platyrhynchos_platyrhynchos_10_12374223_12379211_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12374223 - 12379211

Intron Length:

4989

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTATTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

AATTTCTTATTG

Flanking Amino Acid:

RLELTEARVQVWFQNRRAKW

Intron Amino Acid Position:

101

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

68.4

38.7

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

78.2

0.63

30.8

Minor 5ss

25.2

-2.9

3.2

43.6

Minor BPS

59.3

0.15

1.6

62.43

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030241

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037258

12372718 - 12379597

6880