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Intron Name: Anas_platyrhynchos_platyrhynchos_10_12390097_12400368_F

Intron Information:

Intron Rank:

135708

Intron Class:

major

Intron Phase:

Intron Coordinates:

12390097 - 12400368

Intron Length:

10272

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGAAC

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTACTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAC

U12 Branch Point Sequence:

TTTTCTTTACTG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

74.9

34.9

Major BPS

70.1

0.5

70.3

31.9

Major PPT

82.1

0.72

0.7

78.4

28.8

Minor 5ss

32.6

-2

3.1

42.6

44.5

Minor BPS

0.46

1.6

74.65

38.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023040

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045932

12388558 - 12401707

13150