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Intron Name: Anas_platyrhynchos_platyrhynchos_10_12851846_12853924_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12851846 - 12853924

Intron Length:

2079

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTC|GTAAGTGAT

5'SS Class:

major

3'SS Sequence:

ATCTCCTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTAAC

U12 Branch Point Sequence:

GTGCCCTTAACT

Flanking Amino Acid:

TAIEMAEGAPPLCDMHPMRA

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.3

74.1

36.5

Major BPS

64.7

0.37

1.1

67.2

35.2

Major PPT

82.9

0.74

0.8

77.1

30.8

Minor 5ss

35.9

-1.6

3.3

49.7

41.3

Minor BPS

79.7

1.01

1.2

86.68

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013205

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013846

12838110 - 12900525

62416