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Intron Name: Anas_platyrhynchos_platyrhynchos_10_12921988_12928784_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12921988 - 12928784

Intron Length:

6797

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGA|GCGAGGAAT

5'SS Class:

weak_major

3'SS Sequence:

CCTGAAACTGAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACTAGAC

U12 Branch Point Sequence:

TATGCCTGAAAC

Flanking Amino Acid:

YSLNRRVKGRKTRGTCDSWQ

Intron Amino Acid Position:

609

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.5

0.2

1.3

64.4

40.2

Major BPS

49.1

-0

46.4

36.5

Major PPT

0.07

1.1

50.2

37.1

Minor 5ss

19.4

-3.5

3.8

26.9

37.6

Minor BPS

0.29

1.7

70.21

40.5

Associated Gene:

Gene:

RADX

Ensembl Gene ID:

ENSAPLG00000013841

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014429

12905587 - 12931585

25999