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Intron Name: Anas_platyrhynchos_platyrhynchos_10_12929043_12930388_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12929043 - 12930388

Intron Length:

1346

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCGATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAA

U12 Branch Point Sequence:

TTTTTTTCGATA

Flanking Amino Acid:

GLGYYEVTVLGINHDVAVDV

Intron Amino Acid Position:

695

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.3

0.95

0.9

90.9

28.7

Major BPS

70.8

0.52

70.6

31.6

Major PPT

81.9

0.72

0.9

80.9

31.3

Minor 5ss

41.2

-1

2.9

52.2

44.4

Minor BPS

60.3

0.32

1.5

73.37

32.3

Associated Gene:

Gene:

RADX

Ensembl Gene ID:

ENSAPLG00000013841

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014429

12905587 - 12931585

25999