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Intron Name: Anas_platyrhynchos_platyrhynchos_10_13038879_13039728_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13038879 - 13039728

Intron Length:

850

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

AACTGTTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTAGAT

U12 Branch Point Sequence:

GATGTCTGAATG

Flanking Amino Acid:

VRLVTPQFLKELCNVEEPCE

Intron Amino Acid Position:

242

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.8

77.7

30.1

Major BPS

70.4

0.51

66.8

39.9

Major PPT

76.2

0.59

0.9

69.3

40.8

Minor 5ss

27.6

-2.6

3.3

39.2

46.2

Minor BPS

-0.1

1.6

53.75

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014933

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015620

13023498 - 13048273

24776