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Intron Name: Anas_platyrhynchos_platyrhynchos_10_13039848_13040809_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13039848 - 13040809

Intron Length:

962

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

TGGTTGTGTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAA

U12 Branch Point Sequence:

TTCGTCTTAAAT

Flanking Amino Acid:

FVVDFKYFTHVPTPSCNGFE

Intron Amino Acid Position:

202

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

76.2

28.3

Major BPS

77.8

0.69

78.2

31.8

Major PPT

65.9

0.36

1.1

58.1

47.3

Minor 5ss

35.2

-1.7

2.8

40.3

40.2

Minor BPS

67.4

0.62

1.5

80.39

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014933

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015620

13023498 - 13048273

24776