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Intron Name: Anas_platyrhynchos_platyrhynchos_10_13046961_13048181_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

13046961 - 13048181

Intron Length:

1221

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGGCT

5'SS Class:

major

3'SS Sequence:

CCTTTCCTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTGAC

U12 Branch Point Sequence:

GACTCAGTAAGT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.71

72.4

37.1

Major BPS

62.5

0.31

1.2

54.8

42.1

Major PPT

85.2

0.79

0.7

76.8

31.9

Minor 5ss

31.9

-2.1

3.6

48.1

47.5

Minor BPS

44.1

-0.3

2.4

62.92

46.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014933

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015620

13023498 - 13048273

24776