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Intron Name: Anas_platyrhynchos_platyrhynchos_10_13258786_13259283_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13258786 - 13259283

Intron Length:

498

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCTTAA

5'SS Class:

major

3'SS Sequence:

TTTTGTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATCAC

U12 Branch Point Sequence:

TTTTTTTTGTTT

Flanking Amino Acid:

FSKKCSERWKTMSSKEKAKF

Intron Amino Acid Position:

137

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

1.2

71.3

37.1

Major BPS

70.5

0.51

33.1

Major PPT

93.6

0.98

0.7

92.3

26.6

Minor 5ss

-0.7

2.9

58.2

46.4

Minor BPS

46.8

-0.1

3.4

81.5

34.7

Associated Gene:

Gene:

HMGB3

Ensembl Gene ID:

ENSAPLG00000015880

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048335

13256407 - 13260485

4079

ENSAPLT00000048119

13257264 - 13279944

22681

ENSAPLT00000016562

13257264 - 13280345

23082