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Intron Name: Anas_platyrhynchos_platyrhynchos_10_13347987_13348860_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13347987 - 13348860

Intron Length:

874

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGCATA

5'SS Class:

strong_major

3'SS Sequence:

GTCTGTTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

AAAGCTTTAATT

Flanking Amino Acid:

LFPGESIKVIAKDVMYICPF

Intron Amino Acid Position:

108

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

79.8

35.3

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

83.1

0.74

0.9

80.2

37.3

Minor 5ss

43.1

-0.8

2.9

54.5

43.9

Minor BPS

64.7

0.54

1.3

72.19

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000000577

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035459

13347562 - 13358050

10489

ENSAPLT00000000922

13342038 - 13358050

16013