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Intron Name: Anas_platyrhynchos_platyrhynchos_10_13350343_13355748_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13350343 - 13355748

Intron Length:

5406

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TCATGCTATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTTAC

U12 Branch Point Sequence:

TCTCTCTTACCC

Flanking Amino Acid:

PPEGVSRDYREIQDGHNGYH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

75.8

34.3

Major BPS

69.2

0.48

37.1

Major PPT

0.5

39.7

Minor 5ss

32.5

-2

3.1

35.2

41.4

Minor BPS

62.5

0.37

1.6

71.01

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000000577

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035459

13347562 - 13358050

10489