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Intron Name: Anas_platyrhynchos_platyrhynchos_10_1336873_1337363_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1336873 - 1337363

Intron Length:

491

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCTC

5'SS Class:

strong_major

3'SS Sequence:

TGCTTCTCCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

CCATGCTGATGG

Flanking Amino Acid:

GRPKALPCQQSPTKLSCKGA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

76.9

38.6

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

73.1

0.52

0.8

65.9

Minor 5ss

35.3

-1.7

3.4

50.1

46.5

Minor BPS

-1.1

2.2

36.25

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018238

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038545

1336753 - 1340214

3462