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Intron Name: Anas_platyrhynchos_platyrhynchos_10_13369412_13372707_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13369412 - 13372707

Intron Length:

3296

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATTGA

5'SS Class:

strong_major

3'SS Sequence:

CTCTTGTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTAAT

U12 Branch Point Sequence:

CTACAGTTAATT

Flanking Amino Acid:

RPNVNAVANKATGGGYESED

Intron Amino Acid Position:

294

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

77.4

33.8

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

80.7

0.69

0.8

76.2

32.4

Minor 5ss

38.9

-1.2

2.9

49.9

46.3

Minor BPS

47.7

-0

2.2

67.18

43.5

Associated Gene:

Gene:

MTM1

Ensembl Gene ID:

ENSAPLG00000002352

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002448

13361039 - 13396494

35456

ENSAPLT00000045397

13361039 - 13392619

31581

ENSAPLT00000041091

13361039 - 13396494

35456