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Intron Name: Anas_platyrhynchos_platyrhynchos_10_13372897_13374709_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

13372897 - 13374709

Intron Length:

1813

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTACT

5'SS Class:

strong_major

3'SS Sequence:

GGCACGTGACTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TAATAAA

U12 Branch Point Sequence:

ATTTCTTCCATT

Flanking Amino Acid:

AAFRSRNRIPVLSWIHPENQ

Intron Amino Acid Position:

231

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

80.9

33.1

Major BPS

70.8

0.52

70.6

31.6

Major PPT

47.9

-0.1

35.8

40.2

Minor 5ss

33.4

-1.9

2.8

44.7

42.7

Minor BPS

55.1

0.24

1.9

78.23

38.7

Associated Gene:

Gene:

MTM1

Ensembl Gene ID:

ENSAPLG00000002352

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045397

13361039 - 13392619

31581

ENSAPLT00000041091

13361039 - 13396494

35456

ENSAPLT00000002448

13361039 - 13396494

35456