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Intron Name: Anas_platyrhynchos_platyrhynchos_10_13386736_13392466_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

13386736 - 13392466

Intron Length:

5731

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

GCTTTCTCTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTTAA

U12 Branch Point Sequence:

AAGTCTCCAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

82.5

29.7

Major BPS

63.3

0.33

1.1

55.4

41.7

Major PPT

83.9

0.76

0.8

81.1

30.9

Minor 5ss

35.3

-1.7

3.1

46.4

Minor BPS

-0

1.8

64.56

40.1

Associated Gene:

Gene:

MTM1

Ensembl Gene ID:

ENSAPLG00000002352

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045397

13361039 - 13392619

31581