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Intron Name: Anas_platyrhynchos_platyrhynchos_10_1346352_1346551_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1346352 - 1346551

Intron Length:

200

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAAC

5'SS Class:

strong_major

3'SS Sequence:

CTCCTCTGGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGGCAT

U12 Branch Point Sequence:

TGGTCCCGACCC

Flanking Amino Acid:

VPLGSVGTQDRQCNKSSMGS

Intron Amino Acid Position:

293

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

82.1

Major BPS

45.9

-0.2

1.4

52.7

43.2

Major PPT

66.9

0.38

64.3

36.6

Minor 5ss

32.6

-2

3.1

42.1

Minor BPS

46.7

-0.2

2.1

60.98

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008447

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008766

1344772 - 1346726

1955