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Intron Name: Anas_platyrhynchos_platyrhynchos_10_13671029_13672819_R


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
13671029 - 13672819

Intron Length:
1791

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACT|GTAAGTACT

5'SS Class:
major

3'SS Sequence:
GATTTATTTTTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TAATCAT

U12 Branch Point Sequence:
TATTTTGTAATC

Flanking Amino Acid:
TTFGQKGGNHWWFGIRKDFC

Intron Amino Acid Position:
218

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.8
0.63
1.1
77.8
36.6

Major BPS
80.4
0.76
1
80.3
31.8

Major PPT
77.4
0.62
0.9
74.6
39.9

Minor 5ss
41.3
-1
2.8
62.9
41

Minor BPS
56.8
0.19
2
70.36
35.6

Associated Gene:

Gene:
TMEM185A

Ensembl Gene ID:

Chromosome:
10

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

13670065 - 13684265
14201