Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_10_1372087_1372161_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1372087 - 1372161

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TCCGCCCGCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTCAC

U12 Branch Point Sequence:

CGCCGCTCACCG

Flanking Amino Acid:

LNYRLDMDVQDILSHVTKKE

Intron Amino Acid Position:

227

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

71.2

34.2

Major BPS

57.5

0.19

1.1

60.7

37.6

Major PPT

62.5

0.28

0.9

53.4

36.6

Minor 5ss

27.1

-2.6

3.2

41.6

Minor BPS

38.3

-1

2.1

37.32

44.8

Associated Gene:

Gene:

INPPL1

Ensembl Gene ID:

ENSAPLG00000008443

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025843

1368688 - 1373634

4947

ENSAPLT00000008762

1367322 - 1373389

6068