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Intron Name: Anas_platyrhynchos_platyrhynchos_10_1372529_1372606_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
1372529 - 1372606

Intron Length:
78

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TGG|GTACGGAGG

5'SS Class:
major

3'SS Sequence:
GGTGTCCCCGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CCCCCAT

U12 Branch Point Sequence:
CCCCCATGAGCT

Flanking Amino Acid:
SVKTGIANTLGNKGAVGVSF

Intron Amino Acid Position:
148

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
69.2
0.45
1.1
55.4
48.8

Major BPS
48.9
-0
1.3
58
39.1

Major PPT
66.5
0.37
0.9
58.7
38.3

Minor 5ss
30.2
-2.3
3.2
30.7
42.8

Minor BPS
43.1
-0.4
1.9
55.41
46.1

Associated Gene:

Gene:
INPPL1

Ensembl Gene ID:

Chromosome:
10

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1368688 - 1373634
4947

1367322 - 1373389
6068