Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_10_13735023_13735830_R

Intron Information:

Intron Rank:

150587

Intron Class:

major

Intron Phase:

Intron Coordinates:

13735023 - 13735830

Intron Length:

808

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGTTC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTATAATAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTATAATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

30.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

80.9

0.69

0.9

78.8

33.1

Minor 5ss

41.3

-1

3.3

58.3

46.6

Minor BPS

67.5

0.55

1.5

79.43

30.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028512

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043427

13734889 - 13736570

1682