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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_10_13744575_13745734_F

Intron Information:

Intron Rank:
142355
Intron Class:
major
Intron Phase:
Intron Coordinates:
13744575 - 13745734
Intron Length:
1160

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CAG|GTAAAGGCT
5'SS Class:
strong_major
3'SS Sequence:
ATATTTCCTTCAG|A
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
TATTTAT
U12 Branch Point Sequence:
TCTTTCTTATTT
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
80.8
0.73
1
72.9
36.4
Major BPS
88.7
0.96
0.8
78
36.5
Major PPT
81.4
0.71
0.8
78.6
35.1
Minor 5ss
31.2
-2.1
3.7
47.6
48
Minor BPS
69.5
0.69
1.5
82.89
39.2

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000026670
Chromosome:
10

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000018906
13744364 - 13749054
4691