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Intron Name: Anas_platyrhynchos_platyrhynchos_10_13823074_13824942_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13823074 - 13824942

Intron Length:

1869

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGTAAC

5'SS Class:

major

3'SS Sequence:

CCTTTTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

GAAGAATTAACA

Flanking Amino Acid:

KSSSNPKGVCEEESHNAPTA

Intron Amino Acid Position:

964

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.8

0.61

1.1

74.4

36.1

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

86.5

0.82

0.7

80.3

31.8

Minor 5ss

-1.4

2.8

46.6

41.8

Minor BPS

47.8

-0.1

1.9

57.06

41.1

Associated Gene:

Gene:

AFF2

Ensembl Gene ID:

ENSAPLG00000003660

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030611

13804280 - 14082183

277904

ENSAPLT00000025697

13804280 - 14095768

291489

ENSAPLT00000003772

13804280 - 14163951

359672

ENSAPLT00000045792

13804280 - 14127400

323121