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Intron Name: Anas_platyrhynchos_platyrhynchos_10_13825178_13831467_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13825178 - 13831467

Intron Length:

6290

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTTTT

5'SS Class:

major

3'SS Sequence:

ATCTGTGTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TGGTTCTTATCT

Flanking Amino Acid:

IPNHRLTSTKENSSSSVKKV

Intron Amino Acid Position:

885

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

81.6

33.2

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

70.4

0.46

61.2

44.1

Minor 5ss

47.4

-0.3

2.8

63.8

41.6

Minor BPS

67.2

0.62

1.6

80.16

41.9

Associated Gene:

Gene:

AFF2

Ensembl Gene ID:

ENSAPLG00000003660

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030611

13804280 - 14082183

277904

ENSAPLT00000025697

13804280 - 14095768

291489

ENSAPLT00000003772

13804280 - 14163951

359672

ENSAPLT00000045792

13804280 - 14127400

323121