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Intron Name: Anas_platyrhynchos_platyrhynchos_10_13925861_13928583_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13925861 - 13928583

Intron Length:

2723

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAC

U12 Branch Point Sequence:

ATTTAACTAATG

Flanking Amino Acid:

TKFSIPSKVQDSQHLTSGYN

Intron Amino Acid Position:

390

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.8

86.8

22.8

Major BPS

80.9

0.77

0.8

81.7

25.4

Major PPT

90.8

0.92

0.6

88.2

21.6

Minor 5ss

43.6

-0.7

2.9

58.5

40.4

Minor BPS

47.4

-0.3

2.1

61.19

40.3

Associated Gene:

Gene:

AFF2

Ensembl Gene ID:

ENSAPLG00000003660

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025697

13804280 - 14095768

291489

ENSAPLT00000003772

13804280 - 14163951

359672