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Intron Name: Anas_platyrhynchos_platyrhynchos_10_13925861_13928589_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13925861 - 13928589

Intron Length:

2729

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAAGTA

5'SS Class:

major

3'SS Sequence:

TTCTTTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAC

U12 Branch Point Sequence:

ATTTAACTAATG

Flanking Amino Acid:

EQTKFSIPSKDSQHLTSGYN

Intron Amino Acid Position:

404

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

68.7

36.4

Major BPS

80.9

0.77

0.8

81.7

25.4

Major PPT

90.8

0.92

0.6

88.2

21.6

Minor 5ss

32.3

-2

3.7

48.4

Minor BPS

47.4

-0.3

2.1

61.19

40.3

Associated Gene:

Gene:

AFF2

Ensembl Gene ID:

ENSAPLG00000003660

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045792

13804280 - 14127400

323121

ENSAPLT00000030611

13804280 - 14082183

277904