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Intron Name: Anas_platyrhynchos_platyrhynchos_10_1399757_1402880_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1399757 - 1402880

Intron Length:

3124

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATGGAG

5'SS Class:

major

3'SS Sequence:

CACCTTTATCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTTAT

U12 Branch Point Sequence:

TTTTCTGCACCT

Flanking Amino Acid:

VGNKTDLADKRQITTEEGEQ

Intron Amino Acid Position:

117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.67

65.9

39.9

Major BPS

71.5

0.54

1.1

63.3

42.8

Major PPT

73.3

0.52

0.9

65.2

Minor 5ss

28.6

-2.4

3.5

37.4

47.3

Minor BPS

48.6

-0

2.4

79.65

42.8

Associated Gene:

Gene:

RAB41

Ensembl Gene ID:

ENSAPLG00000008341

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008682

1395745 - 1405442

9698