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Intron Name: Anas_platyrhynchos_platyrhynchos_10_1409095_1409239_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1409095 - 1409239

Intron Length:

145

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCGGA

5'SS Class:

strong_major

3'SS Sequence:

CATTTCGGAGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCCAT

U12 Branch Point Sequence:

GCTTCCCCATTT

Flanking Amino Acid:

NKVSQYLVPQMLKRLHKACV

Intron Amino Acid Position:

213

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

68.5

38.7

Major BPS

59.7

0.24

1.3

68.6

38.9

Major PPT

63.1

0.29

1.1

58.8

41.5

Minor 5ss

30.3

-2.3

3.3

46.8

Minor BPS

-0.2

2.1

65.74

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008333

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008651

1407750 - 1409461

1712