Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_10_1418680_1419719_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1418680 - 1419719

Intron Length:

1040

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTGGAC

5'SS Class:

major

3'SS Sequence:

TTTGTGTTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAGTAAT

U12 Branch Point Sequence:

TTTGTGTTTATA

Flanking Amino Acid:

AAELHHLKQQVQQLQVLLLQ

Intron Amino Acid Position:

401

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.5

0.46

1.1

60.4

38.7

Major BPS

64.3

0.36

1.2

65.3

38.6

Major PPT

81.8

0.71

0.9

76.5

37.7

Minor 5ss

28.5

-2.5

3.6

40.8

45.8

Minor BPS

46.6

-0.2

2.3

65.88

41.1

Associated Gene:

Gene:

KIF4A

Ensembl Gene ID:

ENSAPLG00000008191

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043432

1413056 - 1434021

20966

ENSAPLT00000025805

1413056 - 1434021

20966

ENSAPLT00000008640

1413056 - 1436587

23532