Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_10_14245160_14246621_R

Intron Information:

Intron Rank:

151161

Intron Class:

major

Intron Phase:

Intron Coordinates:

14245160 - 14246621

Intron Length:

1462

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTAAGTGCC

5'SS Class:

major

3'SS Sequence:

ACTTCTTTTAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAC

U12 Branch Point Sequence:

CTTCTTTTAAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

1.1

69.1

37.3

Major BPS

77.8

0.69

0.9

69.4

37.3

Major PPT

74.3

0.55

74.6

33.4

Minor 5ss

35.2

-1.7

3.2

41.6

38.8

Minor BPS

58.1

0.12

1.5

61.29

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028839

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046684

14239194 - 14248067

8874