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Intron Name: Anas_platyrhynchos_platyrhynchos_10_14266412_14266491_R


Intron Information:

Intron Rank:
8

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
14266412 - 14266491

Intron Length:
80

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAAGTTCC

5'SS Class:
strong_major

3'SS Sequence:
ACGTGTGTTTTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTCTCAT

U12 Branch Point Sequence:
CTTACCTCATTT

Flanking Amino Acid:
DTCTFHIYGEDQDAVKKARS

Intron Amino Acid Position:
268

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
95.8
1.08
0.7
84.9
25.9

Major BPS
82.6
0.81
0.9
83.3
27.7

Major PPT
65.7
0.35
1
62
43.9

Minor 5ss
41.5
-0.9
2.7
53.7
43.5

Minor BPS
52.4
0.15
1.9
72.88
44.2

Associated Gene:

Gene:
FMR1

Ensembl Gene ID:

Chromosome:
10

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

14253742 - 14284343
30602

14255288 - 14284343
29056