Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_10_14266663_14270863_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14266663 - 14270863

Intron Length:

4201

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTTGT

5'SS Class:

strong_major

3'SS Sequence:

GTATCCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

TTTGCTGTAATA

Flanking Amino Acid:

RNEEASKQLESSRQLASRFH

Intron Amino Acid Position:

211

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.9

80.5

Major BPS

0.75

78.6

Major PPT

80.7

0.69

0.9

77.4

36.6

Minor 5ss

-0.2

2.5

67.3

43.8

Minor BPS

57.6

0.24

2.1

74.34

38.4

Associated Gene:

Gene:

FMR1

Ensembl Gene ID:

ENSAPLG00000003811

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018067

14253742 - 14284343

30602

ENSAPLT00000003949

14255288 - 14284343

29056