Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_10_1430183_1431516_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1430183 - 1431516

Intron Length:

1334

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGATCT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTTGCTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTGCAC

U12 Branch Point Sequence:

TCTTTCTGCACA

Flanking Amino Acid:

VKGGKKSMMGCCCKGRCGNK

Intron Amino Acid Position:

1122

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

75.1

35.8

Major BPS

52.5

0.06

1.4

65.3

41.6

Major PPT

75.9

0.58

0.8

76.6

Minor 5ss

40.1

-1.1

3.1

49.7

46.1

Minor BPS

56.3

0.19

1.9

71.44

Associated Gene:

Gene:

KIF4A

Ensembl Gene ID:

ENSAPLG00000008191

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025805

1413056 - 1434021

20966

ENSAPLT00000008640

1413056 - 1436587

23532