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Intron Name: Anas_platyrhynchos_platyrhynchos_10_1431637_1432382_F


Intron Information:

Intron Rank:
27

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
1431637 - 1432382

Intron Length:
746

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CCG|GTGAGTAGC

5'SS Class:
strong_major

3'SS Sequence:
CTCTGTCCCTCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTGTAAA

U12 Branch Point Sequence:
AGTGCTTCAAAA

Flanking Amino Acid:
KCRNRDPSFPNATVCEDQTR

Intron Amino Acid Position:
1162

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
82.3
0.76
0.9
72.6
38.9

Major BPS
75.2
0.63
1.1
75.9
36.3

Major PPT
75.7
0.58
0.8
72.9
32

Minor 5ss
31.1
-2.2
2.7
37.6
40

Minor BPS
49.3
-0
1.7
60.15
39.5

Associated Gene:

Gene:
KIF4A

Ensembl Gene ID:

Chromosome:
10

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1413056 - 1434021
20966

1413056 - 1436587
23532