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Intron Name: Anas_platyrhynchos_platyrhynchos_10_1438806_1439008_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1438806 - 1439008

Intron Length:

203

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTAAATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

GTTTTCTTATAT

Flanking Amino Acid:

VSSRPSTPTLGTPSAQTVSV

Intron Amino Acid Position:

163

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.4

0.8

84.2

26.4

Major BPS

100

1.24

0.5

100

Major PPT

78.4

0.64

0.9

75.8

37.9

Minor 5ss

33.8

-1.8

2.9

42.8

44.4

Minor BPS

64.6

0.54

1.7

81.78

39.4

Associated Gene:

Gene:

TAF9

Ensembl Gene ID:

ENSAPLG00000020242

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025152

1437688 - 1441007

3320