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Intron Name: Anas_platyrhynchos_platyrhynchos_10_1439716_1439783_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1439716 - 1439783

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

GCCCCGCCCGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTCAC

U12 Branch Point Sequence:

TGGGGCTCACCG

Flanking Amino Acid:

QSFTSPPPRDFLLDIARQKN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

31.3

Major BPS

52.1

0.05

1.3

41.8

Major PPT

61.4

0.26

0.9

53.3

Minor 5ss

32.3

-2

3.3

46.1

42.2

Minor BPS

-0.9

2.2

43.77

47.7

Associated Gene:

Gene:

TAF9

Ensembl Gene ID:

ENSAPLG00000020242

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025152

1437688 - 1441007

3320