Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_10_14456345_14459616_R

Intron Information:

Intron Rank:

145145

Intron Class:

major

Intron Phase:

Intron Coordinates:

14456345 - 14459616

Intron Length:

3272

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACAGAGC

5'SS Class:

major

3'SS Sequence:

CTTAATACTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

CCTATCTTAATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.4

0.48

1.1

61.3

43.5

Major BPS

0.92

0.9

86.2

29.1

Major PPT

0.43

0.9

59.8

41.2

Minor 5ss

30.9

-2.2

3.4

43.1

44.1

Minor BPS

65.6

0.49

1.3

66.99

40.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025509

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042867

14455926 - 14462795

6870